WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H20J18.1g.1 Sequence Name  H20J18.1g.1
Length (nt)  3425   Chromosome Location  X: 12503887-12509221
Chromosome . Primary Identifier  X Chromosome Location . Start  12503887
Chromosome Location . End  12509221 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H20J18.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004739 scd-1 H20J18.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H20J18.1g H20J18.1g 2688   X: 12504620-12504733

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:H20J18.1g.1 12503887 12509221 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255716   847   X: 12503887-12504733 Caenorhabditis elegans
Exon255736   74   X: 12505015-12505088 Caenorhabditis elegans
Exon255748   166   X: 12505146-12505311 Caenorhabditis elegans
Exon255769   91   X: 12505819-12505909 Caenorhabditis elegans
Exon255782   263   X: 12506151-12506413 Caenorhabditis elegans
Exon255793   135   X: 12506643-12506777 Caenorhabditis elegans
Exon255799   86   X: 12506881-12506966 Caenorhabditis elegans
Exon255817   776   X: 12507071-12507846 Caenorhabditis elegans
Exon255829   923   X: 12507894-12508816 Caenorhabditis elegans
Exon255841   64   X: 12509158-12509221 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:H20J18.1g.1 12503887 12509221 -1

1 Sequence

Length
3425

1 Sequence Ontology Term

Identifier Name Description
transcript