WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H20J18.1a.3 Sequence Name  H20J18.1a.3
Length (nt)  4030   Chromosome Location  X: 12503887-12525772
Chromosome . Primary Identifier  X Chromosome Location . Start  12503887
Chromosome Location . End  12525772 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H20J18.1a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004739 scd-1 H20J18.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H20J18.1a H20J18.1a 2844   X: 12504620-12504733

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:H20J18.1a.3 12503887 12525772 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255719   847   X: 12503887-12504733 Caenorhabditis elegans
Exon255729   74   X: 12505015-12505088 Caenorhabditis elegans
Exon255743   166   X: 12505146-12505311 Caenorhabditis elegans
Exon255753   108   X: 12505607-12505714 Caenorhabditis elegans
Exon255762   91   X: 12505819-12505909 Caenorhabditis elegans
Exon255775   263   X: 12506151-12506413 Caenorhabditis elegans
Exon255787   135   X: 12506643-12506777 Caenorhabditis elegans
Exon255802   134   X: 12506881-12507014 Caenorhabditis elegans
Exon255810   776   X: 12507071-12507846 Caenorhabditis elegans
Exon255822   923   X: 12507894-12508816 Caenorhabditis elegans
Exon255836   62   X: 12509158-12509219 Caenorhabditis elegans
Exon255846   96   X: 12513953-12514048 Caenorhabditis elegans
Exon255853   355   X: 12525418-12525772 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:H20J18.1a.3 12503887 12525772 -1

1 Sequence

Length
4030

1 Sequence Ontology Term

Identifier Name Description
transcript