WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F17E5.1a.1 Sequence Name  F17E5.1a.1
Length (nt)  3373   Chromosome Location  X: 12399517-12414041
Chromosome . Primary Identifier  X Chromosome Location . Start  12399517
Chromosome Location . End  12414041 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F17E5.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002991 lin-2 F17E5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F17E5.1a F17E5.1a 2886   X: 12399988-12400167

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F17E5.1a.1 12399517 12414041 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon255546   651   X: 12399517-12400167 Caenorhabditis elegans
Exon255548   161   X: 12400875-12401035 Caenorhabditis elegans
Exon255550   123   X: 12401083-12401205 Caenorhabditis elegans
Exon255552   127   X: 12401263-12401389 Caenorhabditis elegans
Exon255554   104   X: 12401434-12401537 Caenorhabditis elegans
Exon255556   108   X: 12401587-12401694 Caenorhabditis elegans
Exon255558   79   X: 12401816-12401894 Caenorhabditis elegans
Exon255560   254   X: 12401952-12402205 Caenorhabditis elegans
Exon255562   162   X: 12402301-12402462 Caenorhabditis elegans
Exon255564   115   X: 12402611-12402725 Caenorhabditis elegans
Exon255566   87   X: 12402774-12402860 Caenorhabditis elegans
Exon255568   84   X: 12404276-12404359 Caenorhabditis elegans
Exon255570   75   X: 12405250-12405324 Caenorhabditis elegans
Exon255575   114   X: 12407844-12407957 Caenorhabditis elegans
Exon255576   86   X: 12409093-12409178 Caenorhabditis elegans
Exon255577   97   X: 12409280-12409376 Caenorhabditis elegans
Exon255578   108   X: 12409991-12410098 Caenorhabditis elegans
Exon255579   96   X: 12410492-12410587 Caenorhabditis elegans
Exon255580   176   X: 12411063-12411238 Caenorhabditis elegans
Exon255581   83   X: 12411287-12411369 Caenorhabditis elegans
Exon255582   96   X: 12411417-12411512 Caenorhabditis elegans
Exon255583   184   X: 12412802-12412985 Caenorhabditis elegans
Exon255584   113   X: 12413788-12413900 Caenorhabditis elegans
Exon255585   90   X: 12413952-12414041 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F17E5.1a.1 12399517 12414041 -1

1 Sequence

Length
3373

1 Sequence Ontology Term

Identifier Name Description
transcript