WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00199135 Gene Name  E01G6.4
Sequence Name  ? E01G6.4 Organism  Caenorhabditis elegans
Biotype  SO:0001263 Genetic Position  :±
Length (nt)  ? 139
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00199135

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:E01G6.4 E01G6.4 139   X: 12255600-12255738
 

Other

0 CDSs

0 RNAi Result

13 Allele

Public Name
gk964260
gk964029
gk962707
gk964028
gk963810
gk963337
gk963336
gk963419
gk963420
gk842678
gk652270
gk873319
WBVar01835021

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00199135 12255600 12255738 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_12255471..12255599   129 X: 12255471-12255599 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum Transcripts that showed significantly decreased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. GFold3, logFC < -1 or > 1. WBPaper00066703:L.plantarum-pdxH_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00199135 12255600 12255738 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
139

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_12255739..12256262   524 X: 12255739-12256262 Caenorhabditis elegans