WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:VW06B3R.1a.1 Sequence Name  VW06B3R.1a.1
Length (nt)  1396   Chromosome Location  X: 12018429-12021212
Chromosome . Primary Identifier  X Chromosome Location . Start  12018429
Chromosome Location . End  12021212 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
VW06B3R.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012158 ucr-2.1 VW06B3R.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:VW06B3R.1a VW06B3R.1a 1233   X: 12018439-12018468

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:VW06B3R.1a.1 12018429 12021212 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254842   40   X: 12018429-12018468 Caenorhabditis elegans
Exon254845   97   X: 12018701-12018797 Caenorhabditis elegans
Exon254847   164   X: 12018865-12019028 Caenorhabditis elegans
Exon254849   282   X: 12019290-12019571 Caenorhabditis elegans
Exon254851   152   X: 12019987-12020138 Caenorhabditis elegans
Exon254853   295   X: 12020206-12020500 Caenorhabditis elegans
Exon254855   132   X: 12020637-12020768 Caenorhabditis elegans
Exon254858   234   X: 12020979-12021212 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:VW06B3R.1a.1 12018429 12021212 1

1 Sequence

Length
1396

1 Sequence Ontology Term

Identifier Name Description
transcript