WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49F5.2.1 Sequence Name  C49F5.2.1
Length (nt)  2407   Chromosome Location  X: 11970030-11974679
Chromosome . Primary Identifier  X Chromosome Location . Start  11970030
Chromosome Location . End  11974679 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49F5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008206 set-6 C49F5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49F5.2 C49F5.2 2127   X: 11970307-11970534

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C49F5.2.1 11970030 11974679 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254732   505   X: 11970030-11970534 Caenorhabditis elegans
Exon254733   120   X: 11970601-11970720 Caenorhabditis elegans
Exon254734   552   X: 11971255-11971806 Caenorhabditis elegans
Exon254735   132   X: 11971859-11971990 Caenorhabditis elegans
Exon254736   253   X: 11972521-11972773 Caenorhabditis elegans
Exon254737   308   X: 11972821-11973128 Caenorhabditis elegans
Exon254738   105   X: 11973274-11973378 Caenorhabditis elegans
Exon254739   102   X: 11973493-11973594 Caenorhabditis elegans
Exon254740   96   X: 11974170-11974265 Caenorhabditis elegans
Exon254741   144   X: 11974364-11974507 Caenorhabditis elegans
Exon254742   90   X: 11974590-11974679 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C49F5.2.1 11970030 11974679 -1

1 Sequence

Length
2407

1 Sequence Ontology Term

Identifier Name Description
transcript