WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C40H5.5a.1 Sequence Name  C40H5.5a.1
Length (nt)  1441   Chromosome Location  X: 11764456-11769378
Chromosome . Primary Identifier  X Chromosome Location . Start  11764456
Chromosome Location . End  11769378 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C40H5.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006654 ttx-3 C40H5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C40H5.5a C40H5.5a 1230   X: 11764667-11764774

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C40H5.5a.1 11764456 11769378 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon254134   319   X: 11764456-11764774 Caenorhabditis elegans
Exon254136   111   X: 11764843-11764953 Caenorhabditis elegans
Exon254138   179   X: 11765004-11765182 Caenorhabditis elegans
Exon254140   162   X: 11766556-11766717 Caenorhabditis elegans
Exon254142   70   X: 11766799-11766868 Caenorhabditis elegans
Exon254144   106   X: 11766926-11767031 Caenorhabditis elegans
Exon254146   71   X: 11767339-11767409 Caenorhabditis elegans
Exon254148   101   X: 11767463-11767563 Caenorhabditis elegans
Exon254151   251   X: 11767807-11768057 Caenorhabditis elegans
Exon254152   71   X: 11769308-11769378 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C40H5.5a.1 11764456 11769378 -1

1 Sequence

Length
1441

1 Sequence Ontology Term

Identifier Name Description
transcript