WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00219301 Gene Name  C44C10.15
Sequence Name  ? C44C10.15 Organism  Caenorhabditis elegans
Automated Description  Enriched in male based on RNA-seq studies. Biotype  SO:0001217
Genetic Position  :± Length (nt)  ? 881
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00219301

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C44C10.15.1 C44C10.15.1 548   X: 11699483-11700363
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C44C10.15 C44C10.15 453   X: 11699572-11699607

1 RNAi Result

WormBase ID
WBRNAi00042452

19 Allele

Public Name
gk964260
gk964029
gk962707
gk964028
gk963810
tm10684
tm11105
WBVar01471284
gk675590
gk754682
gk337341
gk294744
gk717191
gk294743
gk294742
gk294741
WBVar00083285
ttTi13368
ttTi13366

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00219301 11699483 11700363 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_11699099..11699482   384 X: 11699099-11699482 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts enriched in male him-5(e1490 animals, comparing to in N2 hermaphrodite animals from L3 larva to young adult stages. DESeq FDR < 0.01. WBPaper00050231:male_enriched

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
    Expr1146440 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/hashimshony2015  

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00219301 11699483 11700363 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
881

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_11700364..11702535   2172 X: 11700364-11702535 Caenorhabditis elegans