WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H05G16.1a.1 Sequence Name  H05G16.1a.1
Length (nt)  4289   Chromosome Location  X: 11572511-11581760
Chromosome . Primary Identifier  X Chromosome Location . Start  11572511
Chromosome Location . End  11581760 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H05G16.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001490 frm-3 H05G16.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H05G16.1a H05G16.1a 3276   X: 11576256-11576381

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:H05G16.1a.1 11572511 11581760 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253715   83   X: 11572511-11572593 Caenorhabditis elegans
Exon253718   133   X: 11576249-11576381 Caenorhabditis elegans
Exon253720   105   X: 11576442-11576546 Caenorhabditis elegans
Exon253723   125   X: 11576609-11576733 Caenorhabditis elegans
Exon253727   97   X: 11577645-11577741 Caenorhabditis elegans
Exon253730   125   X: 11577792-11577916 Caenorhabditis elegans
Exon253733   244   X: 11577960-11578203 Caenorhabditis elegans
Exon253736   161   X: 11578254-11578414 Caenorhabditis elegans
Exon253739   75   X: 11578460-11578534 Caenorhabditis elegans
Exon253743   3141   X: 11578620-11581760 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:H05G16.1a.1 11572511 11581760 1

1 Sequence

Length
4289

1 Sequence Ontology Term

Identifier Name Description
transcript