WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29G6.3f.1 Sequence Name  F29G6.3f.1
Length (nt)  6528   Chromosome Location  X: 11511560-11519066
Chromosome . Primary Identifier  X Chromosome Location . Start  11511560
Chromosome Location . End  11519066 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29G6.3f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009259 hpo-34 F29G6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29G6.3f F29G6.3f 5406   X: 11512963-11517504

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F29G6.3f.1 11511560 11519066 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253441   286   X: 11511560-11511845 Caenorhabditis elegans
Exon253449   48   X: 11511892-11511939 Caenorhabditis elegans
Exon253456   108   X: 11511986-11512093 Caenorhabditis elegans
Exon253463   272   X: 11512138-11512409 Caenorhabditis elegans
Exon253469   58   X: 11512523-11512580 Caenorhabditis elegans
Exon253477   4843   X: 11512662-11517504 Caenorhabditis elegans
Exon253495   108   X: 11517551-11517658 Caenorhabditis elegans
Exon253502   102   X: 11517705-11517806 Caenorhabditis elegans
Exon253509   105   X: 11517854-11517958 Caenorhabditis elegans
Exon253516   118   X: 11518005-11518122 Caenorhabditis elegans
Exon253523   101   X: 11518180-11518280 Caenorhabditis elegans
Exon253531   66   X: 11518324-11518389 Caenorhabditis elegans
Exon253537   81   X: 11518441-11518521 Caenorhabditis elegans
Exon253543   54   X: 11518734-11518787 Caenorhabditis elegans
Exon253549   101   X: 11518845-11518945 Caenorhabditis elegans
Exon253556   77   X: 11518990-11519066 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F29G6.3f.1 11511560 11519066 -1

1 Sequence

Length
6528

1 Sequence Ontology Term

Identifier Name Description
transcript