WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29G6.3c.1 Sequence Name  F29G6.3c.1
Length (nt)  4545   Chromosome Location  X: 11511555-11519017
Chromosome . Primary Identifier  X Chromosome Location . Start  11511555
Chromosome Location . End  11519017 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29G6.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009259 hpo-34 F29G6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29G6.3c F29G6.3c 4362   X: 11511738-11511845

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F29G6.3c.1 11511555 11519017 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253440   291   X: 11511555-11511845 Caenorhabditis elegans
Exon253447   48   X: 11511892-11511939 Caenorhabditis elegans
Exon253454   108   X: 11511986-11512093 Caenorhabditis elegans
Exon253461   272   X: 11512138-11512409 Caenorhabditis elegans
Exon253467   58   X: 11512523-11512580 Caenorhabditis elegans
Exon253474   138   X: 11512662-11512799 Caenorhabditis elegans
Exon253482   381   X: 11514691-11515071 Caenorhabditis elegans
Exon253487   2385   X: 11515120-11517504 Caenorhabditis elegans
Exon253493   108   X: 11517551-11517658 Caenorhabditis elegans
Exon253500   102   X: 11517705-11517806 Caenorhabditis elegans
Exon253507   105   X: 11517854-11517958 Caenorhabditis elegans
Exon253514   118   X: 11518005-11518122 Caenorhabditis elegans
Exon253521   101   X: 11518180-11518280 Caenorhabditis elegans
Exon253530   66   X: 11518324-11518389 Caenorhabditis elegans
Exon253536   81   X: 11518441-11518521 Caenorhabditis elegans
Exon253542   54   X: 11518734-11518787 Caenorhabditis elegans
Exon253548   101   X: 11518845-11518945 Caenorhabditis elegans
Exon253552   28   X: 11518990-11519017 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F29G6.3c.1 11511555 11519017 -1

1 Sequence

Length
4545

1 Sequence Ontology Term

Identifier Name Description
transcript