WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48C5.2.2 Sequence Name  F48C5.2.2
Length (nt)  1088   Chromosome Location  X: 11451616-11454331
Chromosome . Primary Identifier  X Chromosome Location . Start  11451616
Chromosome Location . End  11454331 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48C5.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009843 F48C5.2 F48C5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48C5.2 F48C5.2 513   X: 11452038-11452174

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48C5.2.2 11451616 11454331 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253329   559   X: 11451616-11452174 Caenorhabditis elegans
Exon253332   96   X: 11453399-11453494 Caenorhabditis elegans
Exon253334   80   X: 11453537-11453616 Caenorhabditis elegans
Exon253336   145   X: 11453667-11453811 Caenorhabditis elegans
Exon253337   58   X: 11454072-11454129 Caenorhabditis elegans
Exon253339   150   X: 11454182-11454331 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48C5.2.2 11451616 11454331 -1

1 Sequence

Length
1088

1 Sequence Ontology Term

Identifier Name Description
transcript