WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48C5.1.1 Sequence Name  F48C5.1.1
Length (nt)  1106   Chromosome Location  X: 11444350-11446635
Chromosome . Primary Identifier  X Chromosome Location . Start  11444350
Chromosome Location . End  11446635 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48C5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009842 igeg-2 F48C5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48C5.1 F48C5.1 795   X: 11444646-11444724

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48C5.1.1 11444350 11446635 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon253316   375   X: 11444350-11444724 Caenorhabditis elegans
Exon253317   151   X: 11444828-11444978 Caenorhabditis elegans
Exon253318   95   X: 11445198-11445292 Caenorhabditis elegans
Exon253319   149   X: 11445407-11445555 Caenorhabditis elegans
Exon253320   70   X: 11446066-11446135 Caenorhabditis elegans
Exon253321   148   X: 11446186-11446333 Caenorhabditis elegans
Exon253322   118   X: 11446518-11446635 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48C5.1.1 11444350 11446635 -1

1 Sequence

Length
1106

1 Sequence Ontology Term

Identifier Name Description
transcript