WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42E11.1b.2 Sequence Name  F42E11.1b.2
Length (nt)  3918   Chromosome Location  X: 11359152-11364010
Chromosome . Primary Identifier  X Chromosome Location . Start  11359152
Chromosome Location . End  11364010 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42E11.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003998 pgp-4 F42E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42E11.1b F42E11.1b 3801   X: 11359168-11359263

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F42E11.1b.2 11359152 11364010 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252663   112   X: 11359152-11359263 Caenorhabditis elegans
Exon252668   103   X: 11359316-11359418 Caenorhabditis elegans
Exon252671   143   X: 11359465-11359607 Caenorhabditis elegans
Exon252674   431   X: 11359954-11360384 Caenorhabditis elegans
Exon252677   117   X: 11360432-11360548 Caenorhabditis elegans
Exon252680   406   X: 11360654-11361059 Caenorhabditis elegans
Exon252683   574   X: 11361109-11361682 Caenorhabditis elegans
Exon252686   590   X: 11361733-11362322 Caenorhabditis elegans
Exon252689   204   X: 11362377-11362580 Caenorhabditis elegans
Exon252692   242   X: 11362637-11362878 Caenorhabditis elegans
Exon252695   157   X: 11362925-11363081 Caenorhabditis elegans
Exon252698   482   X: 11363127-11363608 Caenorhabditis elegans
Exon252700   357   X: 11363654-11364010 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F42E11.1b.2 11359152 11364010 1

1 Sequence

Length
3918

1 Sequence Ontology Term

Identifier Name Description
transcript