WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42E11.1a.1 Sequence Name  F42E11.1a.1
Length (nt)  4081   Chromosome Location  X: 11358395-11364050
Chromosome . Primary Identifier  X Chromosome Location . Start  11358395
Chromosome Location . End  11364050 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42E11.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003998 pgp-4 F42E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42E11.1a F42E11.1a 3843   X: 11358523-11358549

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F42E11.1a.1 11358395 11364050 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252661   20   X: 11358395-11358414 Caenorhabditis elegans
Exon252662   104   X: 11358446-11358549 Caenorhabditis elegans
Exon252664   111   X: 11359153-11359263 Caenorhabditis elegans
Exon252666   103   X: 11359316-11359418 Caenorhabditis elegans
Exon252669   143   X: 11359465-11359607 Caenorhabditis elegans
Exon252672   431   X: 11359954-11360384 Caenorhabditis elegans
Exon252675   117   X: 11360432-11360548 Caenorhabditis elegans
Exon252678   406   X: 11360654-11361059 Caenorhabditis elegans
Exon252681   574   X: 11361109-11361682 Caenorhabditis elegans
Exon252684   590   X: 11361733-11362322 Caenorhabditis elegans
Exon252687   204   X: 11362377-11362580 Caenorhabditis elegans
Exon252690   242   X: 11362637-11362878 Caenorhabditis elegans
Exon252693   157   X: 11362925-11363081 Caenorhabditis elegans
Exon252696   482   X: 11363127-11363608 Caenorhabditis elegans
Exon252701   397   X: 11363654-11364050 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F42E11.1a.1 11358395 11364050 1

1 Sequence

Length
4081

1 Sequence Ontology Term

Identifier Name Description
transcript