WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F42E11.1b.1 Sequence Name  F42E11.1b.1
Length (nt)  3917   Chromosome Location  X: 11357816-11363968
Chromosome . Primary Identifier  X Chromosome Location . Start  11357816
Chromosome Location . End  11363968 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42E11.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003998 pgp-4 F42E11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F42E11.1b F42E11.1b 3801   X: 11359168-11359263

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F42E11.1b.1 11357816 11363968 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252660   42   X: 11357816-11357857 Caenorhabditis elegans
Exon252665   111   X: 11359153-11359263 Caenorhabditis elegans
Exon252667   103   X: 11359316-11359418 Caenorhabditis elegans
Exon252670   143   X: 11359465-11359607 Caenorhabditis elegans
Exon252673   431   X: 11359954-11360384 Caenorhabditis elegans
Exon252676   117   X: 11360432-11360548 Caenorhabditis elegans
Exon252679   406   X: 11360654-11361059 Caenorhabditis elegans
Exon252682   574   X: 11361109-11361682 Caenorhabditis elegans
Exon252685   590   X: 11361733-11362322 Caenorhabditis elegans
Exon252688   204   X: 11362377-11362580 Caenorhabditis elegans
Exon252691   242   X: 11362637-11362878 Caenorhabditis elegans
Exon252694   157   X: 11362925-11363081 Caenorhabditis elegans
Exon252697   482   X: 11363127-11363608 Caenorhabditis elegans
Exon252699   315   X: 11363654-11363968 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F42E11.1b.1 11357816 11363968 1

1 Sequence

Length
3917

1 Sequence Ontology Term

Identifier Name Description
transcript