WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00197396 Gene Name  F38B2.7
Sequence Name  ? F38B2.7 Organism  Caenorhabditis elegans
Biotype  SO:0001263 Genetic Position  :±
Length (nt)  ? 138
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00197396

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F38B2.7 F38B2.7 138   X: 11287860-11287997
 

Other

0 CDSs

0 RNAi Result

5 Allele

Public Name
gk964260
gk964029
gk962707
gk964028
gk963810

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00197396 11287860 11287997 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_11287998..11294707   6710 X: 11287998-11294707 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum Transcripts that showed significantly decreased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. GFold3, logFC < -1 or > 1. WBPaper00066703:L.plantarum-pdxH_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00197396 11287860 11287997 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
138

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_11287718..11287859   142 X: 11287718-11287859 Caenorhabditis elegans