WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38B2.1c.1 Sequence Name  F38B2.1c.1
Length (nt)  1848   Chromosome Location  X: 11273270-11275485
Chromosome . Primary Identifier  X Chromosome Location . Start  11273270
Chromosome Location . End  11275485 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38B2.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002050 ifa-1 F38B2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38B2.1c F38B2.1c 1704   X: 11273272-11273341

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F38B2.1c.1 11273270 11275485 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252420   72   X: 11273270-11273341 Caenorhabditis elegans
Exon252423   164   X: 11273390-11273553 Caenorhabditis elegans
Exon252428   114   X: 11273601-11273714 Caenorhabditis elegans
Exon252433   98   X: 11273763-11273860 Caenorhabditis elegans
Exon252438   860   X: 11273937-11274796 Caenorhabditis elegans
Exon252443   140   X: 11274844-11274983 Caenorhabditis elegans
Exon252448   219   X: 11275033-11275251 Caenorhabditis elegans
Exon252454   181   X: 11275305-11275485 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F38B2.1c.1 11273270 11275485 1

1 Sequence

Length
1848

1 Sequence Ontology Term

Identifier Name Description
transcript