WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38B2.1e.1 Sequence Name  F38B2.1e.1
Length (nt)  1954   Chromosome Location  X: 11272797-11275482
Chromosome . Primary Identifier  X Chromosome Location . Start  11272797
Chromosome Location . End  11275482 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38B2.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002050 ifa-1 F38B2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38B2.1e F38B2.1e 1815   X: 11272797-11272905

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F38B2.1e.1 11272797 11275482 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252415   109   X: 11272797-11272905 Caenorhabditis elegans
Exon252419   72   X: 11273270-11273341 Caenorhabditis elegans
Exon252425   164   X: 11273390-11273553 Caenorhabditis elegans
Exon252430   114   X: 11273601-11273714 Caenorhabditis elegans
Exon252435   98   X: 11273763-11273860 Caenorhabditis elegans
Exon252440   860   X: 11273937-11274796 Caenorhabditis elegans
Exon252445   140   X: 11274844-11274983 Caenorhabditis elegans
Exon252450   219   X: 11275033-11275251 Caenorhabditis elegans
Exon252452   178   X: 11275305-11275482 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F38B2.1e.1 11272797 11275482 1

1 Sequence

Length
1954

1 Sequence Ontology Term

Identifier Name Description
transcript