WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38B2.1a.1 Sequence Name  F38B2.1a.1
Length (nt)  1949   Chromosome Location  X: 11271182-11275498
Chromosome . Primary Identifier  X Chromosome Location . Start  11271182
Chromosome Location . End  11275498 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38B2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002050 ifa-1 F38B2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38B2.1a F38B2.1a 1728   X: 11271248-11271269

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F38B2.1a.1 11271182 11275498 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252411   88   X: 11271182-11271269 Caenorhabditis elegans
Exon252416   72   X: 11273270-11273341 Caenorhabditis elegans
Exon252421   164   X: 11273390-11273553 Caenorhabditis elegans
Exon252426   114   X: 11273601-11273714 Caenorhabditis elegans
Exon252431   98   X: 11273763-11273860 Caenorhabditis elegans
Exon252436   860   X: 11273937-11274796 Caenorhabditis elegans
Exon252441   140   X: 11274844-11274983 Caenorhabditis elegans
Exon252446   219   X: 11275033-11275251 Caenorhabditis elegans
Exon252455   194   X: 11275305-11275498 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F38B2.1a.1 11271182 11275498 1

1 Sequence

Length
1949

1 Sequence Ontology Term

Identifier Name Description
transcript