WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08B4.1.1 Sequence Name  R08B4.1.1
Length (nt)  3817   Chromosome Location  X: 11109440-11115887
Chromosome . Primary Identifier  X Chromosome Location . Start  11109440
Chromosome Location . End  11115887 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08B4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001690 grd-1 R08B4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08B4.1 R08B4.1 3414   X: 11109626-11109764

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R08B4.1.1 11109440 11115887 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252010   325   X: 11109440-11109764 Caenorhabditis elegans
Exon252011   119   X: 11110744-11110862 Caenorhabditis elegans
Exon252013   156   X: 11110923-11111078 Caenorhabditis elegans
Exon252015   202   X: 11111735-11111936 Caenorhabditis elegans
Exon252017   246   X: 11111982-11112227 Caenorhabditis elegans
Exon252019   107   X: 11112429-11112535 Caenorhabditis elegans
Exon252021   975   X: 11112649-11113623 Caenorhabditis elegans
Exon252023   375   X: 11113673-11114047 Caenorhabditis elegans
Exon252025   43   X: 11114093-11114135 Caenorhabditis elegans
Exon252027   251   X: 11114254-11114504 Caenorhabditis elegans
Exon252029   279   X: 11114554-11114832 Caenorhabditis elegans
Exon252031   136   X: 11114878-11115013 Caenorhabditis elegans
Exon252033   257   X: 11115185-11115441 Caenorhabditis elegans
Exon252035   60   X: 11115484-11115543 Caenorhabditis elegans
Exon252038   286   X: 11115602-11115887 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R08B4.1.1 11109440 11115887 1

1 Sequence

Length
3817

1 Sequence Ontology Term

Identifier Name Description
transcript