WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21E8.1a.1 Sequence Name  T21E8.1a.1
Length (nt)  3984   Chromosome Location  X: 10871201-10876301
Chromosome . Primary Identifier  X Chromosome Location . Start  10871201
Chromosome Location . End  10876301 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21E8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004000 pgp-6 T21E8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21E8.1a T21E8.1a 3792   X: 10871346-10871708

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T21E8.1a.1 10871201 10876301 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251175   508   X: 10871201-10871708 Caenorhabditis elegans
Exon251178   204   X: 10871754-10871957 Caenorhabditis elegans
Exon251181   465   X: 10872008-10872472 Caenorhabditis elegans
Exon251184   129   X: 10872523-10872651 Caenorhabditis elegans
Exon251187   105   X: 10872696-10872800 Caenorhabditis elegans
Exon251190   363   X: 10872865-10873227 Caenorhabditis elegans
Exon251193   284   X: 10873274-10873557 Caenorhabditis elegans
Exon251196   97   X: 10873608-10873704 Caenorhabditis elegans
Exon251199   90   X: 10873945-10874034 Caenorhabditis elegans
Exon251202   615   X: 10874079-10874693 Caenorhabditis elegans
Exon251205   114   X: 10874743-10874856 Caenorhabditis elegans
Exon251208   172   X: 10874900-10875071 Caenorhabditis elegans
Exon251211   297   X: 10875270-10875566 Caenorhabditis elegans
Exon251214   134   X: 10875614-10875747 Caenorhabditis elegans
Exon251217   110   X: 10875793-10875902 Caenorhabditis elegans
Exon251221   157   X: 10875953-10876109 Caenorhabditis elegans
Exon251224   140   X: 10876162-10876301 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T21E8.1a.1 10871201 10876301 -1

1 Sequence

Length
3984

1 Sequence Ontology Term

Identifier Name Description
transcript