WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05A9.1b.1 Sequence Name  C05A9.1b.1
Length (nt)  3483   Chromosome Location  X: 10854381-10858712
Chromosome . Primary Identifier  X Chromosome Location . Start  10854381
Chromosome Location . End  10858712 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05A9.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003999 pgp-5 C05A9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05A9.1b C05A9.1b 3483   X: 10854381-10854743

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C05A9.1b.1 10854381 10858712 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251110   363   X: 10854381-10854743 Caenorhabditis elegans
Exon251112   204   X: 10854800-10855003 Caenorhabditis elegans
Exon251114   465   X: 10855050-10855514 Caenorhabditis elegans
Exon251116   129   X: 10855560-10855688 Caenorhabditis elegans
Exon251118   105   X: 10855739-10855843 Caenorhabditis elegans
Exon251120   363   X: 10855890-10856252 Caenorhabditis elegans
Exon251122   269   X: 10856298-10856566 Caenorhabditis elegans
Exon251124   100   X: 10856613-10856712 Caenorhabditis elegans
Exon251126   90   X: 10856761-10856850 Caenorhabditis elegans
Exon251128   612   X: 10856898-10857509 Caenorhabditis elegans
Exon251130   114   X: 10857752-10857865 Caenorhabditis elegans
Exon251132   172   X: 10857912-10858083 Caenorhabditis elegans
Exon251134   297   X: 10858125-10858421 Caenorhabditis elegans
Exon251136   134   X: 10858467-10858600 Caenorhabditis elegans
Exon251137   66   X: 10858647-10858712 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C05A9.1b.1 10854381 10858712 -1

1 Sequence

Length
3483

1 Sequence Ontology Term

Identifier Name Description
transcript