WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05A9.1a.1 Sequence Name  C05A9.1a.1
Length (nt)  3991   Chromosome Location  X: 10854216-10859297
Chromosome . Primary Identifier  X Chromosome Location . Start  10854216
Chromosome Location . End  10859297 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05A9.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003999 pgp-5 C05A9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05A9.1a C05A9.1a 3759   X: 10854381-10854743

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C05A9.1a.1 10854216 10859297 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon251109   528   X: 10854216-10854743 Caenorhabditis elegans
Exon251111   204   X: 10854800-10855003 Caenorhabditis elegans
Exon251113   465   X: 10855050-10855514 Caenorhabditis elegans
Exon251115   129   X: 10855560-10855688 Caenorhabditis elegans
Exon251117   105   X: 10855739-10855843 Caenorhabditis elegans
Exon251119   363   X: 10855890-10856252 Caenorhabditis elegans
Exon251121   269   X: 10856298-10856566 Caenorhabditis elegans
Exon251123   100   X: 10856613-10856712 Caenorhabditis elegans
Exon251125   90   X: 10856761-10856850 Caenorhabditis elegans
Exon251127   612   X: 10856898-10857509 Caenorhabditis elegans
Exon251129   114   X: 10857752-10857865 Caenorhabditis elegans
Exon251131   172   X: 10857912-10858083 Caenorhabditis elegans
Exon251133   297   X: 10858125-10858421 Caenorhabditis elegans
Exon251135   134   X: 10858467-10858600 Caenorhabditis elegans
Exon251138   110   X: 10858647-10858756 Caenorhabditis elegans
Exon251139   157   X: 10858852-10859008 Caenorhabditis elegans
Exon251140   67   X: 10859054-10859120 Caenorhabditis elegans
Exon251141   75   X: 10859223-10859297 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C05A9.1a.1 10854216 10859297 -1

1 Sequence

Length
3991

1 Sequence Ontology Term

Identifier Name Description
transcript