WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05A10.5c.1 Sequence Name  T05A10.5c.1
Length (nt)  1134   Chromosome Location  X: 10789682-10791626
Chromosome . Primary Identifier  X Chromosome Location . Start  10789682
Chromosome Location . End  10791626 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A10.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011462 vap-2 T05A10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05A10.5c T05A10.5c 1134   X: 10789682-10789799

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T05A10.5c.1 10789682 10791626 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon250439   118   X: 10789682-10789799 Caenorhabditis elegans
Exon250443   86   X: 10789853-10789938 Caenorhabditis elegans
Exon250446   111   X: 10789985-10790095 Caenorhabditis elegans
Exon250449   229   X: 10790169-10790397 Caenorhabditis elegans
Exon250452   216   X: 10790443-10790658 Caenorhabditis elegans
Exon250455   92   X: 10790854-10790945 Caenorhabditis elegans
Exon250458   145   X: 10790994-10791138 Caenorhabditis elegans
Exon250461   107   X: 10791184-10791290 Caenorhabditis elegans
Exon250462   30   X: 10791597-10791626 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T05A10.5c.1 10789682 10791626 -1

1 Sequence

Length
1134

1 Sequence Ontology Term

Identifier Name Description
transcript