WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05A10.5a.1 Sequence Name  T05A10.5a.1
Length (nt)  1493   Chromosome Location  X: 10789611-10792018
Chromosome . Primary Identifier  X Chromosome Location . Start  10789611
Chromosome Location . End  10792018 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A10.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011462 vap-2 T05A10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05A10.5a T05A10.5a 1422   X: 10789682-10789799

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T05A10.5a.1 10789611 10792018 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon250438   189   X: 10789611-10789799 Caenorhabditis elegans
Exon250441   86   X: 10789853-10789938 Caenorhabditis elegans
Exon250444   111   X: 10789985-10790095 Caenorhabditis elegans
Exon250447   229   X: 10790169-10790397 Caenorhabditis elegans
Exon250450   216   X: 10790443-10790658 Caenorhabditis elegans
Exon250453   92   X: 10790854-10790945 Caenorhabditis elegans
Exon250456   145   X: 10790994-10791138 Caenorhabditis elegans
Exon250459   107   X: 10791184-10791290 Caenorhabditis elegans
Exon250463   158   X: 10791597-10791754 Caenorhabditis elegans
Exon250465   106   X: 10791817-10791922 Caenorhabditis elegans
Exon250467   54   X: 10791965-10792018 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T05A10.5a.1 10789611 10792018 -1

1 Sequence

Length
1493

1 Sequence Ontology Term

Identifier Name Description
transcript