WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00014320 Gene Name  F11A1.t1
Sequence Name  ? F11A1.t1 Organism  Caenorhabditis elegans
Automated Description  Is affected by adr-1 based on RNA-seq studies. Biotype  SO:0001272
Genetic Position  :± Length (nt)  ? 72
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00014320

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F11A1.t1 F11A1.t1 72   X: 10667593-10667664
 

Other

0 CDSs

0 RNAi Result

4 Allele

Public Name
gk964260
gk962707
tm11461
WBVar02074534

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00014320 10667593 10667664 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_10667665..10668161   497 X: 10667665-10668161 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in adr-1(tm668) comparing to in N2. DESeq2, p-value < 0.05 and a fold enrichment log2fold > 0.5. WBPaper00055226:adr-1(tm668)_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00014320 10667593 10667664 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
72

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_10667103..10667592   490 X: 10667103-10667592 Caenorhabditis elegans