WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57C7.2a.1 Sequence Name  F57C7.2a.1
Length (nt)  2360   Chromosome Location  X: 10576960-10581034
Chromosome . Primary Identifier  X Chromosome Location . Start  10576960
Chromosome Location . End  10581034 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57C7.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003733 nhx-5 F57C7.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57C7.2a F57C7.2a 1893   X: 10577129-10577227

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F57C7.2a.1 10576960 10581034 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249479   268   X: 10576960-10577227 Caenorhabditis elegans
Exon249482   142   X: 10577289-10577430 Caenorhabditis elegans
Exon249486   115   X: 10577475-10577589 Caenorhabditis elegans
Exon249490   109   X: 10577751-10577859 Caenorhabditis elegans
Exon249494   155   X: 10577906-10578060 Caenorhabditis elegans
Exon249498   95   X: 10578129-10578223 Caenorhabditis elegans
Exon249502   106   X: 10578276-10578381 Caenorhabditis elegans
Exon249506   89   X: 10578430-10578518 Caenorhabditis elegans
Exon249510   150   X: 10578559-10578708 Caenorhabditis elegans
Exon249514   98   X: 10578964-10579061 Caenorhabditis elegans
Exon249518   105   X: 10579109-10579213 Caenorhabditis elegans
Exon249522   86   X: 10579257-10579342 Caenorhabditis elegans
Exon249526   88   X: 10579463-10579550 Caenorhabditis elegans
Exon249530   92   X: 10579598-10579689 Caenorhabditis elegans
Exon249534   171   X: 10579734-10579904 Caenorhabditis elegans
Exon249538   106   X: 10580132-10580237 Caenorhabditis elegans
Exon249545   40   X: 10580600-10580639 Caenorhabditis elegans
Exon249549   345   X: 10580690-10581034 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F57C7.2a.1 10576960 10581034 1

1 Sequence

Length
2360

1 Sequence Ontology Term

Identifier Name Description
transcript