WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F46F6.2a.1 Sequence Name  F46F6.2a.1
Length (nt)  3839   Chromosome Location  X: 10397243-10402576
Chromosome . Primary Identifier  X Chromosome Location . Start  10397243
Chromosome Location . End  10402576 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F46F6.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009793 pkn-1 F46F6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F6.2a F46F6.2a 3039   X: 10397396-10397517

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F46F6.2a.1 10397243 10402576 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248859   275   X: 10397243-10397517 Caenorhabditis elegans
Exon248860   293   X: 10398133-10398425 Caenorhabditis elegans
Exon248864   923   X: 10398475-10399397 Caenorhabditis elegans
Exon248868   220   X: 10399470-10399689 Caenorhabditis elegans
Exon248872   102   X: 10399741-10399842 Caenorhabditis elegans
Exon248876   125   X: 10400118-10400242 Caenorhabditis elegans
Exon248880   772   X: 10400477-10401248 Caenorhabditis elegans
Exon248884   194   X: 10401300-10401493 Caenorhabditis elegans
Exon248888   147   X: 10401545-10401691 Caenorhabditis elegans
Exon248893   788   X: 10401789-10402576 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F46F6.2a.1 10397243 10402576 1

1 Sequence

Length
3839

1 Sequence Ontology Term

Identifier Name Description
transcript