WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07E3.3b.1 Sequence Name  R07E3.3b.1
Length (nt)  1305   Chromosome Location  X: 10333860-10338200
Chromosome . Primary Identifier  X Chromosome Location . Start  10333860
Chromosome Location . End  10338200 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07E3.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011104 cut-5 R07E3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07E3.3b R07E3.3b 1140   X: 10334014-10334160

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R07E3.3b.1 10333860 10338200 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon248684   301   X: 10333860-10334160 Caenorhabditis elegans
Exon248686   86   X: 10334455-10334540 Caenorhabditis elegans
Exon248688   100   X: 10334588-10334687 Caenorhabditis elegans
Exon248690   160   X: 10334812-10334971 Caenorhabditis elegans
Exon248692   116   X: 10335021-10335136 Caenorhabditis elegans
Exon248694   115   X: 10335229-10335343 Caenorhabditis elegans
Exon248697   143   X: 10335438-10335580 Caenorhabditis elegans
Exon248701   159   X: 10337623-10337781 Caenorhabditis elegans
Exon248703   75   X: 10337830-10337904 Caenorhabditis elegans
Exon248705   50   X: 10338151-10338200 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R07E3.3b.1 10333860 10338200 -1

1 Sequence

Length
1305

1 Sequence Ontology Term

Identifier Name Description
transcript