WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07B1.8a.1 Sequence Name  R07B1.8a.1
Length (nt)  1587   Chromosome Location  X: 9870632-9872654
Chromosome . Primary Identifier  X Chromosome Location . Start  9870632
Chromosome Location . End  9872654 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B1.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001608 pugs-5 R07B1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B1.8a R07B1.8a 1278   X: 9870886-9870960

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R07B1.8a.1 9870632 9872654 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247292   329   X: 9870632-9870960 Caenorhabditis elegans
Exon247294   224   X: 9871020-9871243 Caenorhabditis elegans
Exon247296   239   X: 9871290-9871528 Caenorhabditis elegans
Exon247298   197   X: 9871576-9871772 Caenorhabditis elegans
Exon247300   119   X: 9871820-9871938 Caenorhabditis elegans
Exon247302   379   X: 9872130-9872508 Caenorhabditis elegans
Exon247304   100   X: 9872555-9872654 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R07B1.8a.1 9870632 9872654 -1

1 Sequence

Length
1587

1 Sequence Ontology Term

Identifier Name Description
transcript