WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07B1.3.1 Sequence Name  R07B1.3.1
Length (nt)  1728   Chromosome Location  X: 9858365-9861738
Chromosome . Primary Identifier  X Chromosome Location . Start  9858365
Chromosome Location . End  9861738 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B1.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011076 scav-5 R07B1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B1.3 R07B1.3 1611   X: 9858393-9858509

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:R07B1.3.1 9858365 9861738 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247242   145   X: 9858365-9858509 Caenorhabditis elegans
Exon247243   176   X: 9858563-9858738 Caenorhabditis elegans
Exon247244   151   X: 9858785-9858935 Caenorhabditis elegans
Exon247245   101   X: 9858979-9859079 Caenorhabditis elegans
Exon247246   70   X: 9859124-9859193 Caenorhabditis elegans
Exon247247   87   X: 9859241-9859327 Caenorhabditis elegans
Exon247248   148   X: 9859510-9859657 Caenorhabditis elegans
Exon247249   235   X: 9859704-9859938 Caenorhabditis elegans
Exon247250   92   X: 9860600-9860691 Caenorhabditis elegans
Exon247251   140   X: 9860857-9860996 Caenorhabditis elegans
Exon247252   74   X: 9861293-9861366 Caenorhabditis elegans
Exon247253   309   X: 9861430-9861738 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:R07B1.3.1 9858365 9861738 1

1 Sequence

Length
1728

1 Sequence Ontology Term

Identifier Name Description
transcript