WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47A4.3a.1 Sequence Name  F47A4.3a.1
Length (nt)  2570   Chromosome Location  X: 9823752-9831288
Chromosome . Primary Identifier  X Chromosome Location . Start  9823752
Chromosome Location . End  9831288 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47A4.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009800 rrc-1 F47A4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47A4.3a F47A4.3a 2280   X: 9823964-9824052

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F47A4.3a.1 9823752 9831288 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247167   301   X: 9823752-9824052 Caenorhabditis elegans
Exon247170   126   X: 9824300-9824425 Caenorhabditis elegans
Exon247173   178   X: 9825003-9825180 Caenorhabditis elegans
Exon247177   241   X: 9825418-9825658 Caenorhabditis elegans
Exon247179   208   X: 9825705-9825912 Caenorhabditis elegans
Exon247182   122   X: 9825958-9826079 Caenorhabditis elegans
Exon247185   336   X: 9826333-9826668 Caenorhabditis elegans
Exon247188   293   X: 9826712-9827004 Caenorhabditis elegans
Exon247191   129   X: 9827485-9827613 Caenorhabditis elegans
Exon247194   123   X: 9827666-9827788 Caenorhabditis elegans
Exon247197   84   X: 9828588-9828671 Caenorhabditis elegans
Exon247200   130   X: 9828721-9828850 Caenorhabditis elegans
Exon247203   150   X: 9829086-9829235 Caenorhabditis elegans
Exon247209   149   X: 9831140-9831288 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F47A4.3a.1 9823752 9831288 -1

1 Sequence

Length
2570

1 Sequence Ontology Term

Identifier Name Description
transcript