WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47A4.1a.1 Sequence Name  F47A4.1a.1
Length (nt)  1901   Chromosome Location  X: 9801078-9807662
Chromosome . Primary Identifier  X Chromosome Location . Start  9801078
Chromosome Location . End  9807662 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47A4.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009799 lgc-47 F47A4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47A4.1a F47A4.1a 1230   X: 9801474-9801544

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F47A4.1a.1 9801078 9807662 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247122   467   X: 9801078-9801544 Caenorhabditis elegans
Exon247124   110   X: 9802103-9802212 Caenorhabditis elegans
Exon247126   105   X: 9802262-9802366 Caenorhabditis elegans
Exon247128   100   X: 9802463-9802562 Caenorhabditis elegans
Exon247130   166   X: 9803901-9804066 Caenorhabditis elegans
Exon247132   105   X: 9804500-9804604 Caenorhabditis elegans
Exon247134   119   X: 9804714-9804832 Caenorhabditis elegans
Exon247136   130   X: 9805780-9805909 Caenorhabditis elegans
Exon247138   65   X: 9805960-9806024 Caenorhabditis elegans
Exon247140   158   X: 9806086-9806243 Caenorhabditis elegans
Exon247144   108   X: 9806922-9807029 Caenorhabditis elegans
Exon247146   268   X: 9807395-9807662 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F47A4.1a.1 9801078 9807662 -1

1 Sequence

Length
1901

1 Sequence Ontology Term

Identifier Name Description
transcript