WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E2.1a.3 Sequence Name  F49E2.1a.3
Length (nt)  1896   Chromosome Location  X: 9561860-9565981
Chromosome . Primary Identifier  X Chromosome Location . Start  9561860
Chromosome Location . End  9565981 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E2.1a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009885 moc-5 F49E2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E2.1a F49E2.1a 1170   X: 9563259-9563314

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F49E2.1a.3 9561860 9565981 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon246332   183   X: 9561860-9562042 Caenorhabditis elegans
Exon246335   183   X: 9562092-9562274 Caenorhabditis elegans
Exon246342   72   X: 9562328-9562399 Caenorhabditis elegans
Exon246349   116   X: 9562926-9563041 Caenorhabditis elegans
Exon246363   226   X: 9563089-9563314 Caenorhabditis elegans
Exon246374   121   X: 9563364-9563484 Caenorhabditis elegans
Exon246383   339   X: 9564560-9564898 Caenorhabditis elegans
Exon246388   120   X: 9564956-9565075 Caenorhabditis elegans
Exon246393   104   X: 9565283-9565386 Caenorhabditis elegans
Exon246398   265   X: 9565444-9565708 Caenorhabditis elegans
Exon246404   167   X: 9565815-9565981 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F49E2.1a.3 9561860 9565981 -1

1 Sequence

Length
1896

1 Sequence Ontology Term

Identifier Name Description
transcript