WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E2.5s.1 Sequence Name  F49E2.5s.1
Length (nt)  3974   Chromosome Location  X: 9552891-9560798
Chromosome . Primary Identifier  X Chromosome Location . Start  9552891
Chromosome Location . End  9560798 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E2.5s.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009888 F49E2.5 F49E2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E2.5s F49E2.5s 3054   X: 9552891-9553000

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F49E2.5s.1 9552891 9560798 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245869   110   X: 9552891-9553000 Caenorhabditis elegans
Exon245894   88   X: 9553049-9553136 Caenorhabditis elegans
Exon245923   432   X: 9553451-9553882 Caenorhabditis elegans
Exon245952   222   X: 9553937-9554158 Caenorhabditis elegans
Exon245995   132   X: 9554692-9554823 Caenorhabditis elegans
Exon246016   423   X: 9554903-9555325 Caenorhabditis elegans
Exon246031   162   X: 9555416-9555577 Caenorhabditis elegans
Exon246045   48   X: 9555626-9555673 Caenorhabditis elegans
Exon246077   90   X: 9556628-9556717 Caenorhabditis elegans
Exon246103   69   X: 9556766-9556834 Caenorhabditis elegans
Exon246137   189   X: 9557218-9557406 Caenorhabditis elegans
Exon246163   156   X: 9557795-9557950 Caenorhabditis elegans
Exon246189   424   X: 9558259-9558682 Caenorhabditis elegans
Exon246215   140   X: 9558956-9559095 Caenorhabditis elegans
Exon246241   120   X: 9559227-9559346 Caenorhabditis elegans
Exon246267   90   X: 9559478-9559567 Caenorhabditis elegans
Exon246293   75   X: 9559617-9559691 Caenorhabditis elegans
Exon246312   1004   X: 9559795-9560798 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F49E2.5s.1 9552891 9560798 1

1 Sequence

Length
3974

1 Sequence Ontology Term

Identifier Name Description
transcript