WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E2.5k.1 Sequence Name  F49E2.5k.1
Length (nt)  2100   Chromosome Location  X: 9552891-9559878
Chromosome . Primary Identifier  X Chromosome Location . Start  9552891
Chromosome Location . End  9559878 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E2.5k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009888 F49E2.5 F49E2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E2.5k F49E2.5k 2100   X: 9552891-9553000

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F49E2.5k.1 9552891 9559878 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245861   110   X: 9552891-9553000 Caenorhabditis elegans
Exon245883   88   X: 9553049-9553136 Caenorhabditis elegans
Exon245912   432   X: 9553451-9553882 Caenorhabditis elegans
Exon245941   222   X: 9553937-9554158 Caenorhabditis elegans
Exon246066   90   X: 9556628-9556717 Caenorhabditis elegans
Exon246092   69   X: 9556766-9556834 Caenorhabditis elegans
Exon246152   156   X: 9557795-9557950 Caenorhabditis elegans
Exon246178   424   X: 9558259-9558682 Caenorhabditis elegans
Exon246204   140   X: 9558956-9559095 Caenorhabditis elegans
Exon246230   120   X: 9559227-9559346 Caenorhabditis elegans
Exon246256   90   X: 9559478-9559567 Caenorhabditis elegans
Exon246282   75   X: 9559617-9559691 Caenorhabditis elegans
Exon246301   84   X: 9559795-9559878 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F49E2.5k.1 9552891 9559878 1

1 Sequence

Length
2100

1 Sequence Ontology Term

Identifier Name Description
transcript