WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E2.5g.1 Sequence Name  F49E2.5g.1
Length (nt)  1587   Chromosome Location  X: 9552891-9555595
Chromosome . Primary Identifier  X Chromosome Location . Start  9552891
Chromosome Location . End  9555595 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E2.5g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009888 F49E2.5 F49E2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E2.5g F49E2.5g 1587   X: 9552891-9553000

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F49E2.5g.1 9552891 9555595 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245857   110   X: 9552891-9553000 Caenorhabditis elegans
Exon245877   88   X: 9553049-9553136 Caenorhabditis elegans
Exon245906   432   X: 9553451-9553882 Caenorhabditis elegans
Exon245935   222   X: 9553937-9554158 Caenorhabditis elegans
Exon245980   132   X: 9554692-9554823 Caenorhabditis elegans
Exon246001   423   X: 9554903-9555325 Caenorhabditis elegans
Exon246033   180   X: 9555416-9555595 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F49E2.5g.1 9552891 9555595 1

1 Sequence

Length
1587

1 Sequence Ontology Term

Identifier Name Description
transcript