WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E2.5n.2 Sequence Name  F49E2.5n.2
Length (nt)  4369   Chromosome Location  X: 9552839-9560799
Chromosome . Primary Identifier  X Chromosome Location . Start  9552839
Chromosome Location . End  9560799 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E2.5n.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009888 F49E2.5 F49E2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E2.5n F49E2.5n 3396   X: 9552891-9553000

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F49E2.5n.2 9552839 9560799 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245846   162   X: 9552839-9553000 Caenorhabditis elegans
Exon245889   88   X: 9553049-9553136 Caenorhabditis elegans
Exon245918   432   X: 9553451-9553882 Caenorhabditis elegans
Exon245947   222   X: 9553937-9554158 Caenorhabditis elegans
Exon245973   249   X: 9554299-9554547 Caenorhabditis elegans
Exon245990   132   X: 9554692-9554823 Caenorhabditis elegans
Exon246011   423   X: 9554903-9555325 Caenorhabditis elegans
Exon246027   162   X: 9555416-9555577 Caenorhabditis elegans
Exon246041   48   X: 9555626-9555673 Caenorhabditis elegans
Exon246072   90   X: 9556628-9556717 Caenorhabditis elegans
Exon246098   69   X: 9556766-9556834 Caenorhabditis elegans
Exon246111   93   X: 9556958-9557050 Caenorhabditis elegans
Exon246132   189   X: 9557218-9557406 Caenorhabditis elegans
Exon246158   156   X: 9557795-9557950 Caenorhabditis elegans
Exon246184   424   X: 9558259-9558682 Caenorhabditis elegans
Exon246210   140   X: 9558956-9559095 Caenorhabditis elegans
Exon246236   120   X: 9559227-9559346 Caenorhabditis elegans
Exon246262   90   X: 9559478-9559567 Caenorhabditis elegans
Exon246288   75   X: 9559617-9559691 Caenorhabditis elegans
Exon246318   1005   X: 9559795-9560799 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F49E2.5n.2 9552839 9560799 1

1 Sequence

Length
4369

1 Sequence Ontology Term

Identifier Name Description
transcript