WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07B5.4a.1 Sequence Name  C07B5.4a.1
Length (nt)  1804   Chromosome Location  X: 9529660-9536631
Chromosome . Primary Identifier  X Chromosome Location . Start  9529660
Chromosome Location . End  9536631 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07B5.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007409 rtkn-1 C07B5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07B5.4a C07B5.4a 1548   X: 9529726-9529764

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C07B5.4a.1 9529660 9536631 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245784   105   X: 9529660-9529764 Caenorhabditis elegans
Exon245787   119   X: 9531971-9532089 Caenorhabditis elegans
Exon245791   74   X: 9532578-9532651 Caenorhabditis elegans
Exon245795   121   X: 9533748-9533868 Caenorhabditis elegans
Exon245799   139   X: 9533913-9534051 Caenorhabditis elegans
Exon245803   154   X: 9534094-9534247 Caenorhabditis elegans
Exon245807   233   X: 9534322-9534554 Caenorhabditis elegans
Exon245811   280   X: 9534606-9534885 Caenorhabditis elegans
Exon245815   134   X: 9535523-9535656 Caenorhabditis elegans
Exon245817   121   X: 9535703-9535823 Caenorhabditis elegans
Exon245820   59   X: 9535875-9535933 Caenorhabditis elegans
Exon245825   265   X: 9536367-9536631 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C07B5.4a.1 9529660 9536631 1

1 Sequence

Length
1804

1 Sequence Ontology Term

Identifier Name Description
transcript