WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20B5.3b.1 Sequence Name  T20B5.3b.1
Length (nt)  3080   Chromosome Location  X: 9343335-9347430
Chromosome . Primary Identifier  X Chromosome Location . Start  9343335
Chromosome Location . End  9347430 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20B5.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020596 oga-1 T20B5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20B5.3b T20B5.3b 2619   X: 9343744-9343907

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T20B5.3b.1 9343335 9347430 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244291   573   X: 9343335-9343907 Caenorhabditis elegans
Exon244293   322   X: 9343985-9344306 Caenorhabditis elegans
Exon244294   271   X: 9344360-9344630 Caenorhabditis elegans
Exon244297   297   X: 9344688-9344984 Caenorhabditis elegans
Exon244299   254   X: 9345066-9345319 Caenorhabditis elegans
Exon244301   223   X: 9345371-9345593 Caenorhabditis elegans
Exon244303   466   X: 9345713-9346178 Caenorhabditis elegans
Exon244306   163   X: 9346223-9346385 Caenorhabditis elegans
Exon244308   236   X: 9346429-9346664 Caenorhabditis elegans
Exon244310   150   X: 9346996-9347145 Caenorhabditis elegans
Exon244312   56   X: 9347255-9347310 Caenorhabditis elegans
Exon244314   69   X: 9347362-9347430 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T20B5.3b.1 9343335 9347430 -1

1 Sequence

Length
3080

1 Sequence Ontology Term

Identifier Name Description
transcript