WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20B5.3a.1 Sequence Name  T20B5.3a.1
Length (nt)  3026   Chromosome Location  X: 9343333-9347428
Chromosome . Primary Identifier  X Chromosome Location . Start  9343333
Chromosome Location . End  9347428 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20B5.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020596 oga-1 T20B5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20B5.3a T20B5.3a 2565   X: 9343744-9343907

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T20B5.3a.1 9343333 9347428 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244290   575   X: 9343333-9343907 Caenorhabditis elegans
Exon244292   322   X: 9343985-9344306 Caenorhabditis elegans
Exon244295   265   X: 9344366-9344630 Caenorhabditis elegans
Exon244296   297   X: 9344688-9344984 Caenorhabditis elegans
Exon244298   254   X: 9345066-9345319 Caenorhabditis elegans
Exon244300   223   X: 9345371-9345593 Caenorhabditis elegans
Exon244302   148   X: 9345713-9345860 Caenorhabditis elegans
Exon244304   270   X: 9345909-9346178 Caenorhabditis elegans
Exon244305   163   X: 9346223-9346385 Caenorhabditis elegans
Exon244307   236   X: 9346429-9346664 Caenorhabditis elegans
Exon244309   150   X: 9346996-9347145 Caenorhabditis elegans
Exon244311   56   X: 9347255-9347310 Caenorhabditis elegans
Exon244313   67   X: 9347362-9347428 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T20B5.3a.1 9343333 9347428 -1

1 Sequence

Length
3026

1 Sequence Ontology Term

Identifier Name Description
transcript