WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20B5.1.1 Sequence Name  T20B5.1.1
Length (nt)  3246   Chromosome Location  X: 9338675-9342900
Chromosome . Primary Identifier  X Chromosome Location . Start  9338675
Chromosome Location . End  9342900 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20B5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000161 apa-2 T20B5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20B5.1 T20B5.1 2778   X: 9338678-9338810

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T20B5.1.1 9338675 9342900 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244282   136   X: 9338675-9338810 Caenorhabditis elegans
Exon244283   143   X: 9338889-9339031 Caenorhabditis elegans
Exon244284   324   X: 9339239-9339562 Caenorhabditis elegans
Exon244285   798   X: 9339738-9340535 Caenorhabditis elegans
Exon244286   390   X: 9340585-9340974 Caenorhabditis elegans
Exon244287   581   X: 9341267-9341847 Caenorhabditis elegans
Exon244288   331   X: 9341915-9342245 Caenorhabditis elegans
Exon244289   543   X: 9342358-9342900 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T20B5.1.1 9338675 9342900 1

1 Sequence

Length
3246

1 Sequence Ontology Term

Identifier Name Description
transcript