WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0416.1c.1 Sequence Name  B0416.1c.1
Length (nt)  2817   Chromosome Location  X: 9305495-9310238
Chromosome . Primary Identifier  X Chromosome Location . Start  9305495
Chromosome Location . End  9310238 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0416.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015177 tmc-2 B0416.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0416.1c B0416.1c 2817   X: 9305495-9305591

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0416.1c.1 9305495 9310238 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244182   97   X: 9305495-9305591 Caenorhabditis elegans
Exon244186   215   X: 9305640-9305854 Caenorhabditis elegans
Exon244190   116   X: 9305899-9306014 Caenorhabditis elegans
Exon244194   138   X: 9306069-9306206 Caenorhabditis elegans
Exon244198   270   X: 9306354-9306623 Caenorhabditis elegans
Exon244202   196   X: 9306669-9306864 Caenorhabditis elegans
Exon244206   58   X: 9307248-9307305 Caenorhabditis elegans
Exon244210   250   X: 9307354-9307603 Caenorhabditis elegans
Exon244214   126   X: 9307751-9307876 Caenorhabditis elegans
Exon244218   79   X: 9307924-9308002 Caenorhabditis elegans
Exon244222   440   X: 9308098-9308537 Caenorhabditis elegans
Exon244226   105   X: 9308660-9308764 Caenorhabditis elegans
Exon244230   117   X: 9308817-9308933 Caenorhabditis elegans
Exon244233   57   X: 9309009-9309065 Caenorhabditis elegans
Exon244236   111   X: 9309117-9309227 Caenorhabditis elegans
Exon244240   117   X: 9309569-9309685 Caenorhabditis elegans
Exon244244   93   X: 9309736-9309828 Caenorhabditis elegans
Exon244248   85   X: 9309907-9309991 Caenorhabditis elegans
Exon244252   66   X: 9310040-9310105 Caenorhabditis elegans
Exon244254   81   X: 9310158-9310238 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0416.1c.1 9305495 9310238 1

1 Sequence

Length
2817

1 Sequence Ontology Term

Identifier Name Description
transcript