WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0416.1a.1 Sequence Name  B0416.1a.1
Length (nt)  3968   Chromosome Location  X: 9303724-9310431
Chromosome . Primary Identifier  X Chromosome Location . Start  9303724
Chromosome Location . End  9310431 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0416.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015177 tmc-2 B0416.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0416.1a B0416.1a 3717   X: 9303782-9303922

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0416.1a.1 9303724 9310431 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244169   199   X: 9303724-9303922 Caenorhabditis elegans
Exon244170   83   X: 9304225-9304307 Caenorhabditis elegans
Exon244172   141   X: 9304367-9304507 Caenorhabditis elegans
Exon244174   265   X: 9304558-9304822 Caenorhabditis elegans
Exon244176   123   X: 9305107-9305229 Caenorhabditis elegans
Exon244178   146   X: 9305282-9305427 Caenorhabditis elegans
Exon244180   98   X: 9305494-9305591 Caenorhabditis elegans
Exon244184   215   X: 9305640-9305854 Caenorhabditis elegans
Exon244188   116   X: 9305899-9306014 Caenorhabditis elegans
Exon244192   138   X: 9306069-9306206 Caenorhabditis elegans
Exon244196   270   X: 9306354-9306623 Caenorhabditis elegans
Exon244200   196   X: 9306669-9306864 Caenorhabditis elegans
Exon244204   58   X: 9307248-9307305 Caenorhabditis elegans
Exon244208   250   X: 9307354-9307603 Caenorhabditis elegans
Exon244212   126   X: 9307751-9307876 Caenorhabditis elegans
Exon244216   79   X: 9307924-9308002 Caenorhabditis elegans
Exon244220   440   X: 9308098-9308537 Caenorhabditis elegans
Exon244224   105   X: 9308660-9308764 Caenorhabditis elegans
Exon244228   117   X: 9308817-9308933 Caenorhabditis elegans
Exon244232   57   X: 9309009-9309065 Caenorhabditis elegans
Exon244234   111   X: 9309117-9309227 Caenorhabditis elegans
Exon244238   117   X: 9309569-9309685 Caenorhabditis elegans
Exon244242   93   X: 9309736-9309828 Caenorhabditis elegans
Exon244246   85   X: 9309907-9309991 Caenorhabditis elegans
Exon244250   66   X: 9310040-9310105 Caenorhabditis elegans
Exon244256   274   X: 9310158-9310431 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0416.1a.1 9303724 9310431 1

1 Sequence

Length
3968

1 Sequence Ontology Term

Identifier Name Description
transcript