WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48C5.3.1 Sequence Name  C48C5.3.1
Length (nt)  1298   Chromosome Location  X: 8957530-8961170
Chromosome . Primary Identifier  X Chromosome Location . Start  8957530
Chromosome Location . End  8961170 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48C5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016748 aexr-3 C48C5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48C5.3 C48C5.3 1014   X: 8957809-8957913

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C48C5.3.1 8957530 8961170 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon243237   384   X: 8957530-8957913 Caenorhabditis elegans
Exon243238   72   X: 8958097-8958168 Caenorhabditis elegans
Exon243239   134   X: 8958223-8958356 Caenorhabditis elegans
Exon243240   266   X: 8958432-8958697 Caenorhabditis elegans
Exon243241   89   X: 8959409-8959497 Caenorhabditis elegans
Exon243242   183   X: 8959600-8959782 Caenorhabditis elegans
Exon243243   87   X: 8960954-8961040 Caenorhabditis elegans
Exon243244   83   X: 8961088-8961170 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C48C5.3.1 8957530 8961170 -1

1 Sequence

Length
1298

1 Sequence Ontology Term

Identifier Name Description
transcript