Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:C06E2.11 | C06E2.11 |
92
 |
X: 8882381-8882472 |
Other
10 Allele
| Public Name |
|---|
| gk964260 |
| gk962707 |
| gk963732 |
| gk964126 |
| tm11356 |
| gk962626 |
| tm12640 |
| WBVar00081595 |
| WBVar02075421 |
| WBVar02079383 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00197211 | 8882381 | 8882472 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_8882473..8886389 | 3917 | X: 8882473-8886389 | Caenorhabditis elegans |
2 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Starvation for 8 hours at mid-L4 larva stage. | Transcripts that showed significantly increased expression in cep-1(gk138) animals starved for 8 hours on unseeded plate at mid-L4 larva stage. | Differential expression analysis was performed using the quasi-likelihood F-test with the generalized linear model (GLM) approach in edgeR. Fold change > 2, FDR < 0.05. | WBPaper00067829:starvation_upregulated_cep-1(gk138) |
| Genes differentially expressed in pgrn-1(tm985) and ced-1(e1735) but not in ced-3(n717) as compared to N2E. | Differential expression analysis was performed using the EdgeR Bioconductor package (19910308), and differentially expressed genes were selected based on False Discovery Rate (FDR Benjamini Hochberg adjusted p-values) estimated at <=5%. | WBPaper00044246:pgrn-1_ced-1_downregulated |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_8880407..8882380 | 1974 | X: 8880407-8882380 | Caenorhabditis elegans |
