WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09E2.4a.1 Sequence Name  K09E2.4a.1
Length (nt)  3784   Chromosome Location  X: 8660619-8671822
Chromosome . Primary Identifier  X Chromosome Location . Start  8660619
Chromosome Location . End  8671822 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09E2.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004369 rig-1 K09E2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09E2.4a K09E2.4a 3252   X: 8661294-8661369

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K09E2.4a.1 8660619 8671822 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon242651   49   X: 8660619-8660667 Caenorhabditis elegans
Exon242653   92   X: 8661278-8661369 Caenorhabditis elegans
Exon242655   187   X: 8661434-8661620 Caenorhabditis elegans
Exon242658   172   X: 8661675-8661846 Caenorhabditis elegans
Exon242661   130   X: 8662926-8663055 Caenorhabditis elegans
Exon242664   140   X: 8663102-8663241 Caenorhabditis elegans
Exon242667   426   X: 8663674-8664099 Caenorhabditis elegans
Exon242671   171   X: 8664287-8664457 Caenorhabditis elegans
Exon242674   205   X: 8664506-8664710 Caenorhabditis elegans
Exon242678   337   X: 8664762-8665098 Caenorhabditis elegans
Exon242682   223   X: 8665144-8665366 Caenorhabditis elegans
Exon242685   138   X: 8665412-8665549 Caenorhabditis elegans
Exon242690   136   X: 8666073-8666208 Caenorhabditis elegans
Exon242698   174   X: 8669291-8669464 Caenorhabditis elegans
Exon242705   128   X: 8670084-8670211 Caenorhabditis elegans
Exon242713   288   X: 8670324-8670611 Caenorhabditis elegans
Exon242721   152   X: 8670914-8671065 Caenorhabditis elegans
Exon242734   636   X: 8671187-8671822 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K09E2.4a.1 8660619 8671822 1

1 Sequence

Length
3784

1 Sequence Ontology Term

Identifier Name Description
transcript