Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:T01B10.11 | T01B10.11 |
149
 |
X: 8487882-8488030 |
Other
9 Allele
| Public Name |
|---|
| gk964260 |
| gk962707 |
| gk963896 |
| gk963732 |
| gk964126 |
| gk964401 |
| gk964402 |
| WBVar01782369 |
| gk287540 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00198347 | 8487882 | 8488030 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_8488031..8491736 | 3706 | X: 8488031-8491736 | Caenorhabditis elegans |
4 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Transcripts that showed significantly increased expression in ilc-17.1(syb5296) comparing to in N2 animals at L4 larva stage. | DESeq2, fold change > 2, FDR < 0.05. | WBPaper00066594:ilc-17.1(syb5296)_upregulated | |
| Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum | Transcripts that showed significantly decreased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. | GFold3, logFC < -1 or > 1. | WBPaper00066703:L.plantarum-pdxH_downregulated |
| Transcripts that showed significantly decreased expression in RB1311 edc-3(ok1427) comparing to in N2 in mixed stage embryos. | fold change > 2, FDR < 0.05 | WBPaper00067291:edc-3(ok1427)_downregulated | |
| Transcripts that showed significantly decreased expression in FD135 edc-4(qe49) comparing to in N2 in mixed stage embryos. | fold change > 2, FDR < 0.05 | WBPaper00067291:edc-4(qe49)_downregulated |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_8487110..8487881 | 772 | X: 8487110-8487881 | Caenorhabditis elegans |
