Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:F45E1.11 | F45E1.11 |
192
 |
X: 8001815-8002006 |
Other
19 Allele
| Public Name |
|---|
| gk964260 |
| gk962707 |
| gk964193 |
| gk964194 |
| gk963896 |
| gk963732 |
| gk964088 |
| gk964087 |
| WBVar02124443 |
| WBVar02124444 |
| WBVar01816135 |
| gk286510 |
| gk286509 |
| gk286508 |
| WBVar02005269 |
| gk651375 |
| gk487831 |
| gk314580 |
| gk866358 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00197655 | 8001815 | 8002006 | 1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_8002007..8003571 | 1565 | X: 8002007-8003571 | Caenorhabditis elegans |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Neuronally enriched transcripts according to a comparison of neuronal nuclei IP samples to total nuclei using isolation of nuclei from tagged specific cell types (INTACT) technology. | DESEQ2, fold change > 2 and FDR < 0.01. | WBPaper00062103:neuron_enriched | |
| ncRNAs with significantly decreased expression in cep-1(gk138) than in N2 after UV irradiation, according to RNAseq. | ncRNAs with more than 2 fold difference in expression are considered differentially expressed | WBPaper00045380:cep-1(gk138)_downregulated_UV | |
| ncRNAs with significantly increased expression in cep-1(gk138) than in N2 under normal conditions, according to RNAseq. | ncRNAs with more than 2 fold difference in expression are considered differentially expressed | WBPaper00045380:cep-1(gk138)_upregulated_normal |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_7998230..8001814 | 3585 | X: 7998230-8001814 | Caenorhabditis elegans |
